Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 AC104640.1-201ENST00000562617 2109 ntBASIC16.38■□□□□ 0.21
HIPK4Q8NE63 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 AC005363.2-201ENST00000618631 242 ntBASIC16.38■□□□□ 0.21
HIPK4Q8NE63 LINC02228-204ENST00000642115 2962 ntBASIC16.38■□□□□ 0.21
HIPK4Q8NE63 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.38■□□□□ 0.21
HIPK4Q8NE63 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 AL359075.1-203ENST00000462729 1002 ntBASIC16.37■□□□□ 0.21
HIPK4Q8NE63 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.37■□□□□ 0.21
HIPK4Q8NE63 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 AC097374.2-201ENST00000618617 1306 ntBASIC16.37■□□□□ 0.21
HIPK4Q8NE63 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK4Q8NE63 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 TERF1P1-201ENST00000311003 1181 ntBASIC16.36■□□□□ 0.21
HIPK4Q8NE63 HBZP1-201ENST00000354915 429 ntBASIC16.36■□□□□ 0.21
HIPK4Q8NE63 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 AC117947.1-201ENST00000427448 529 ntBASIC16.36■□□□□ 0.21
HIPK4Q8NE63 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK4Q8NE63 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms