Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 AC106886.1-201ENST00000568660 600 ntBASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 AL391825.1-201ENST00000457671 1364 ntBASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RP1L1Q8IWN7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AC026120.1-201ENST00000611536 926 ntBASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AC098614.1-201ENST00000368528 745 ntBASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AC132938.2-201ENST00000579188 680 ntBASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AL591163.1-201ENST00000641757 987 ntBASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RP1L1Q8IWN7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms