Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 FAM220CP-201ENST00000395253 831 ntBASIC15.79■□□□□ 0.12
CCDC71Q8IV32 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 MED15P5-201ENST00000423150 992 ntBASIC15.79■□□□□ 0.12
CCDC71Q8IV32 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC71Q8IV32 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 BX005266.1-201ENST00000473402 457 ntBASIC15.78■□□□□ 0.12
CCDC71Q8IV32 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 AC034105.1-201ENST00000563488 319 ntBASIC15.78■□□□□ 0.12
CCDC71Q8IV32 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 AC008735.5-201ENST00000623544 497 ntBASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 AP002414.3-201ENST00000589352 1468 ntBASIC15.78■□□□□ 0.12
CCDC71Q8IV32 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC71Q8IV32 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 AC096633.1-201ENST00000422446 749 ntBASIC15.77■□□□□ 0.12
CCDC71Q8IV32 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 AC007967.3-201ENST00000434308 558 ntBASIC15.77■□□□□ 0.12
CCDC71Q8IV32 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 PGAM5P1-201ENST00000518923 814 ntBASIC15.77■□□□□ 0.12
CCDC71Q8IV32 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 AC105339.3-201ENST00000560043 636 ntBASIC15.77■□□□□ 0.12
CCDC71Q8IV32 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 Z83851.2-201ENST00000609564 659 ntBASIC15.77■□□□□ 0.12
CCDC71Q8IV32 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC71Q8IV32 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms