Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 RHOQP3-201ENST00000437982 621 ntBASIC16.1■□□□□ 0.17
RAB43Q86YS6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB43Q86YS6 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAB43Q86YS6 ELL2P1-201ENST00000413990 1906 ntBASIC16.09■□□□□ 0.17
RAB43Q86YS6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.09■□□□□ 0.17
RAB43Q86YS6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CEND1P1-201ENST00000451006 455 ntBASIC16.09■□□□□ 0.17
RAB43Q86YS6 CXCL1P1-201ENST00000502804 216 ntBASIC16.09■□□□□ 0.17
RAB43Q86YS6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 AL139327.4-201ENST00000612362 153 ntBASIC16.09■□□□□ 0.17
RAB43Q86YS6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB43Q86YS6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB43Q86YS6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB43Q86YS6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RAB43Q86YS6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RAB43Q86YS6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB43Q86YS6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB43Q86YS6 AL135999.2-201ENST00000622438 1686 ntBASIC16.08■□□□□ 0.17
RAB43Q86YS6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB43Q86YS6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB43Q86YS6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms