Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC073592.5-201ENST00000624854 528 ntBASIC17.41■□□□□ 0.38
CCDC25Q86WR0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC25Q86WR0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AC090616.6-201ENST00000582640 721 ntBASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AC024909.3-201ENST00000611513 2257 ntBASIC17.4■□□□□ 0.38
CCDC25Q86WR0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC25Q86WR0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC25Q86WR0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC25Q86WR0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CCDC25Q86WR0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC25Q86WR0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC25Q86WR0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC25Q86WR0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC25Q86WR0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC25Q86WR0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms