Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 GCSHP5-201ENST00000443090 522 ntBASIC17.11■□□□□ 0.33
CROCCP2Q86T23 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 AL390719.2-201ENST00000606993 987 ntBASIC17.11■□□□□ 0.33
CROCCP2Q86T23 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP2Q86T23 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 MIR935-201ENST00000401179 91 ntBASIC17.1■□□□□ 0.33
CROCCP2Q86T23 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 ACTG1P4-201ENST00000425123 1122 ntBASIC17.1■□□□□ 0.33
CROCCP2Q86T23 TSPY7P-201ENST00000431358 1114 ntBASIC17.1■□□□□ 0.33
CROCCP2Q86T23 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 AC023824.1-201ENST00000562945 2975 ntBASIC17.1■□□□□ 0.33
CROCCP2Q86T23 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP2Q86T23 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 AC068418.2-201ENST00000577309 3703 ntBASIC17.09■□□□□ 0.33
CROCCP2Q86T23 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.09■□□□□ 0.33
CROCCP2Q86T23 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 AL138831.2-201ENST00000606564 490 ntBASIC17.09■□□□□ 0.33
CROCCP2Q86T23 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CROCCP2Q86T23 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 AC092850.2-201ENST00000623821 2697 ntBASIC17.08■□□□□ 0.33
CROCCP2Q86T23 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP2Q86T23 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CROCCP2Q86T23 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms