Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 TIMM8BP1-201ENST00000452384 211 ntBASIC19.89■□□□□ 0.77
CTR9Q6PD62 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 FAM86C2P-203ENST00000528684 1004 ntBASIC19.89■□□□□ 0.77
CTR9Q6PD62 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 AL135744.1-201ENST00000565098 629 ntBASIC19.89■□□□□ 0.77
CTR9Q6PD62 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTR9Q6PD62 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.89■□□□□ 0.77
CTR9Q6PD62 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 AKAP8P1-201ENST00000434743 1349 ntBASIC19.88■□□□□ 0.77
CTR9Q6PD62 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 MST1L-201ENST00000442552 2185 ntBASIC19.88■□□□□ 0.77
CTR9Q6PD62 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTR9Q6PD62 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTR9Q6PD62 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 AL391005.1-201ENST00000623953 2435 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 SPDYE11-202ENST00000450699 704 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 AC079140.1-201ENST00000508039 487 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 AC093520.2-201ENST00000561830 333 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 SPDYE9P-201ENST00000570642 692 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 SPDYE10P-202ENST00000612005 668 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 SPDYE8P-202ENST00000612377 668 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 AL391256.1-201ENST00000443260 1855 ntBASIC19.87■□□□□ 0.77
CTR9Q6PD62 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTR9Q6PD62 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CTR9Q6PD62 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTR9Q6PD62 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CTR9Q6PD62 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms