Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 AC026748.1-201ENST00000624349 3251 ntBASIC15.86■□□□□ 0.13
LPCAT4Q643R3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 CCR12P-201ENST00000446203 998 ntBASIC15.86■□□□□ 0.13
LPCAT4Q643R3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 AC106881.1-201ENST00000605849 3329 ntBASIC15.86■□□□□ 0.13
LPCAT4Q643R3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 AL135999.2-201ENST00000622438 1686 ntBASIC15.86■□□□□ 0.13
LPCAT4Q643R3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.86■□□□□ 0.13
LPCAT4Q643R3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CICP24-201ENST00000605464 2705 ntBASIC15.85■□□□□ 0.13
LPCAT4Q643R3 AC112504.1-201ENST00000623415 1841 ntBASIC15.85■□□□□ 0.13
LPCAT4Q643R3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.85■□□□□ 0.13
LPCAT4Q643R3 AC104581.4-201ENST00000623126 3052 ntBASIC15.85■□□□□ 0.13
LPCAT4Q643R3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 MTCL1P1-201ENST00000446207 792 ntBASIC15.85■□□□□ 0.13
LPCAT4Q643R3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LPCAT4Q643R3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.84■□□□□ 0.13
LPCAT4Q643R3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms