Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 KRT8P39-201ENST00000396270 1433 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 SNX33P1-201ENST00000592116 1762 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 FAM197Y8-203ENST00000450145 560 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 AC105339.3-201ENST00000560043 636 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 TP73-AS1-207ENST00000624167 988 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 AP001350.2-201ENST00000625104 1094 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 ALOX12P2-203ENST00000570921 1945 ntBASIC16.03■□□□□ 0.16
SPIN4Q56A73 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPIN4Q56A73 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.03■□□□□ 0.16
SPIN4Q56A73 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 GGT3P-204ENST00000453783 1664 ntBASIC16.02■□□□□ 0.16
SPIN4Q56A73 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 KRT18P67-201ENST00000432816 1264 ntBASIC16.02■□□□□ 0.16
SPIN4Q56A73 EMBP1-201ENST00000458200 901 ntBASIC16.02■□□□□ 0.16
SPIN4Q56A73 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 IGHV3-65-201ENST00000523210 341 ntBASIC16.02■□□□□ 0.16
SPIN4Q56A73 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 AL356488.2-201ENST00000602755 427 ntBASIC16.02■□□□□ 0.16
SPIN4Q56A73 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPIN4Q56A73 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.02■□□□□ 0.16
SPIN4Q56A73 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.02■□□□□ 0.15
SPIN4Q56A73 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SPIN4Q56A73 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPIN4Q56A73 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPIN4Q56A73 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SPIN4Q56A73 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPIN4Q56A73 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPIN4Q56A73 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPIN4Q56A73 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
SPIN4Q56A73 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPIN4Q56A73 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SPIN4Q56A73 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPIN4Q56A73 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms