Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ALFQ53S48 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.25■□□□□ 0.35
ALFQ53S48 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ALFQ53S48 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.24■□□□□ 0.35
ALFQ53S48 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ALFQ53S48 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ALFQ53S48 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.24■□□□□ 0.35
ALFQ53S48 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 RNU1-129P-201ENST00000384064 167 ntBASIC17.24■□□□□ 0.35
ALFQ53S48 FAM58CP-201ENST00000435741 640 ntBASIC17.24■□□□□ 0.35
ALFQ53S48 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.24■□□□□ 0.35
ALFQ53S48 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.24■□□□□ 0.35
ALFQ53S48 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.24■□□□□ 0.35
ALFQ53S48 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.24■□□□□ 0.35
ALFQ53S48 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.24■□□□□ 0.35
ALFQ53S48 U1.21-201ENST00000580816 167 ntBASIC17.24■□□□□ 0.35
ALFQ53S48 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 C20orf181-201ENST00000623918 480 ntBASIC17.24■□□□□ 0.35
ALFQ53S48 AP001350.2-201ENST00000625104 1094 ntBASIC17.24■□□□□ 0.35
ALFQ53S48 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.24■□□□□ 0.35
ALFQ53S48 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ALFQ53S48 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ALFQ53S48 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALFQ53S48 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.24■□□□□ 0.35
ALFQ53S48 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALFQ53S48 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ALFQ53S48 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALFQ53S48 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.23■□□□□ 0.35
ALFQ53S48 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.23■□□□□ 0.35
ALFQ53S48 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.23■□□□□ 0.35
ALFQ53S48 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.23■□□□□ 0.35
ALFQ53S48 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.23■□□□□ 0.35
ALFQ53S48 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
ALFQ53S48 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.23■□□□□ 0.35
ALFQ53S48 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.23■□□□□ 0.35
ALFQ53S48 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
ALFQ53S48 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
ALFQ53S48 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.23■□□□□ 0.35
ALFQ53S48 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALFQ53S48 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ALFQ53S48 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.22■□□□□ 0.35
ALFQ53S48 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ALFQ53S48 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
ALFQ53S48 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.22■□□□□ 0.35
ALFQ53S48 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALFQ53S48 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.22■□□□□ 0.35
ALFQ53S48 HTR5BP-201ENST00000430851 1154 ntBASIC17.22■□□□□ 0.35
ALFQ53S48 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.22■□□□□ 0.35
ALFQ53S48 AP002490.2-201ENST00000524791 560 ntBASIC17.22■□□□□ 0.35
ALFQ53S48 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.22■□□□□ 0.35
ALFQ53S48 AL031055.1-201ENST00000606362 631 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms