Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.22■□□□□ 0.67
USH1GQ495M9 KRT18P32-201ENST00000424695 1287 ntBASIC19.22■□□□□ 0.67
USH1GQ495M9 AL645939.2-201ENST00000427340 991 ntBASIC19.22■□□□□ 0.67
USH1GQ495M9 FAM58DP-201ENST00000428076 619 ntBASIC19.22■□□□□ 0.67
USH1GQ495M9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.22■□□□□ 0.67
USH1GQ495M9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.22■□□□□ 0.67
USH1GQ495M9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 IGHV3-62-201ENST00000520057 340 ntBASIC19.22■□□□□ 0.67
USH1GQ495M9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.22■□□□□ 0.67
USH1GQ495M9 LINC00628-201ENST00000628516 1289 ntBASIC19.22■□□□□ 0.67
USH1GQ495M9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.21■□□□□ 0.67
USH1GQ495M9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 UXT-AS1-201ENST00000590504 1525 ntBASIC19.21■□□□□ 0.67
USH1GQ495M9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.21■□□□□ 0.67
USH1GQ495M9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USH1GQ495M9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USH1GQ495M9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.21■□□□□ 0.67
USH1GQ495M9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USH1GQ495M9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.21■□□□□ 0.67
USH1GQ495M9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
USH1GQ495M9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
USH1GQ495M9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.21■□□□□ 0.67
USH1GQ495M9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.21■□□□□ 0.67
USH1GQ495M9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 AC009093.7-201ENST00000623853 1223 ntBASIC19.21■□□□□ 0.67
USH1GQ495M9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USH1GQ495M9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USH1GQ495M9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 LINC00895-201ENST00000629028 1637 ntBASIC19.21■□□□□ 0.67
USH1GQ495M9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USH1GQ495M9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USH1GQ495M9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
USH1GQ495M9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USH1GQ495M9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
USH1GQ495M9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.2■□□□□ 0.66
USH1GQ495M9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
USH1GQ495M9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.2■□□□□ 0.66
USH1GQ495M9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.2■□□□□ 0.66
USH1GQ495M9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.2■□□□□ 0.66
USH1GQ495M9 HMGN1P19-201ENST00000436976 333 ntBASIC19.2■□□□□ 0.66
USH1GQ495M9 CYMP-203ENST00000474680 1263 ntBASIC19.2■□□□□ 0.66
USH1GQ495M9 HLA-J-203ENST00000494367 1087 ntBASIC19.2■□□□□ 0.66
USH1GQ495M9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.2■□□□□ 0.66
USH1GQ495M9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
USH1GQ495M9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USH1GQ495M9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USH1GQ495M9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms