Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-BQ31612 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.17■□□□□ 0.18
HLA-BQ31612 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-BQ31612 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-BQ31612 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-BQ31612 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-BQ31612 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-BQ31612 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HLA-BQ31612 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-BQ31612 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLA-BQ31612 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
HLA-BQ31612 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-BQ31612 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 IGHV3-71-201ENST00000523324 359 ntBASIC16.16■□□□□ 0.18
HLA-BQ31612 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-BQ31612 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLA-BQ31612 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 AL138688.1-201ENST00000624851 1594 ntBASIC16.16■□□□□ 0.18
HLA-BQ31612 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-BQ31612 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-BQ31612 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-BQ31612 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-BQ31612 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HLA-BQ31612 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-BQ31612 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HLA-BQ31612 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HLA-BQ31612 DGCR5-201ENST00000399539 862 ntBASIC16.15■□□□□ 0.18
HLA-BQ31612 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 AL080243.2-201ENST00000418783 582 ntBASIC16.15■□□□□ 0.18
HLA-BQ31612 DFFBP1-201ENST00000433250 979 ntBASIC16.15■□□□□ 0.18
HLA-BQ31612 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 GIMAP3P-201ENST00000495150 836 ntBASIC16.15■□□□□ 0.18
HLA-BQ31612 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-BQ31612 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 AL671710.1-201ENST00000610245 2349 ntBASIC16.15■□□□□ 0.18
HLA-BQ31612 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-BQ31612 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 BTBD7P1-201ENST00000447253 1453 ntBASIC16.15■□□□□ 0.18
HLA-BQ31612 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-BQ31612 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-BQ31612 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-BQ31612 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.14■□□□□ 0.18
HLA-BQ31612 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.14■□□□□ 0.18
HLA-BQ31612 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
HLA-BQ31612 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-BQ31612 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-BQ31612 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-BQ31612 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-BQ31612 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-BQ31612 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-BQ31612 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-BQ31612 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HLA-BQ31612 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-BQ31612 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-BQ31612 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms