Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 AC006504.4-201ENST00000592118 1568 ntBASIC16.98■□□□□ 0.31
PRAMEP78395 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 AC008741.2-201ENST00000612792 3115 ntBASIC16.98■□□□□ 0.31
PRAMEP78395 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEP78395 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEP78395 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEP78395 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 RNPS1P1-201ENST00000507437 918 ntBASIC16.98■□□□□ 0.31
PRAMEP78395 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEP78395 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 AL121912.1-201ENST00000603683 238 ntBASIC16.98■□□□□ 0.31
PRAMEP78395 AL805961.1-202ENST00000641562 540 ntBASIC16.98■□□□□ 0.31
PRAMEP78395 AF228730.7-201ENST00000641842 219 ntBASIC16.98■□□□□ 0.31
PRAMEP78395 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PRAMEP78395 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PRAMEP78395 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEP78395 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PRAMEP78395 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEP78395 PCDHB19P-201ENST00000570871 2371 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.97■□□□□ 0.31
PRAMEP78395 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEP78395 AL391256.1-201ENST00000443260 1855 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEP78395 AC004870.1-201ENST00000315132 882 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEP78395 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 FAM197Y8-203ENST00000450145 560 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 PAWRP1-201ENST00000451083 565 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEP78395 AF186996.4-201ENST00000467186 377 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEP78395 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 TP73-AS1-207ENST00000624167 988 ntBASIC16.97■□□□□ 0.31
PRAMEP78395 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEP78395 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEP78395 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEP78395 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PRAMEP78395 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEP78395 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PRAMEP78395 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEP78395 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEP78395 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms