Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.93□□□□□ -0.5
RPL39P62891 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.93□□□□□ -0.5
RPL39P62891 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.93□□□□□ -0.5
RPL39P62891 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.93□□□□□ -0.5
RPL39P62891 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RPL39P62891 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.93□□□□□ -0.5
RPL39P62891 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RPL39P62891 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.93□□□□□ -0.5
RPL39P62891 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RPL39P62891 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RPL39P62891 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RPL39P62891 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.93□□□□□ -0.5
RPL39P62891 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 AC009336.1-201ENST00000608941 1553 ntBASIC11.92□□□□□ -0.5
RPL39P62891 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 AC103564.2-201ENST00000432853 1299 ntBASIC11.92□□□□□ -0.5
RPL39P62891 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.92□□□□□ -0.5
RPL39P62891 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 AC122714.2-201ENST00000502787 707 ntBASIC11.92□□□□□ -0.5
RPL39P62891 STK19B-204ENST00000512515 211 ntBASIC11.92□□□□□ -0.5
RPL39P62891 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 AL441883.1-201ENST00000566170 1045 ntBASIC11.92□□□□□ -0.5
RPL39P62891 AC005332.3-201ENST00000589904 676 ntBASIC11.92□□□□□ -0.5
RPL39P62891 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 AL138966.2-201ENST00000621997 464 ntBASIC11.92□□□□□ -0.5
RPL39P62891 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 AL596087.1-201ENST00000400979 1969 ntBASIC11.92□□□□□ -0.5
RPL39P62891 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RPL39P62891 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
RPL39P62891 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RPL39P62891 LINC01568-207ENST00000641790 1380 ntBASIC11.92□□□□□ -0.5
RPL39P62891 AL136379.1-201ENST00000623471 2642 ntBASIC11.91□□□□□ -0.5
RPL39P62891 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.91□□□□□ -0.5
RPL39P62891 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.91□□□□□ -0.5
RPL39P62891 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.91□□□□□ -0.5
RPL39P62891 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RPL39P62891 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RPL39P62891 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.91□□□□□ -0.5
RPL39P62891 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
RPL39P62891 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RPL39P62891 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms