Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 FAM207CP-201ENST00000443486 507 ntBASIC19.67■□□□□ 0.74
RHBDL3P58872 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.67■□□□□ 0.74
RHBDL3P58872 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 HLA-V-204ENST00000476601 1289 ntBASIC19.67■□□□□ 0.74
RHBDL3P58872 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RHBDL3P58872 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.67■□□□□ 0.74
RHBDL3P58872 LINC02560-201ENST00000596379 459 ntBASIC19.67■□□□□ 0.74
RHBDL3P58872 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 AC008761.3-201ENST00000624803 892 ntBASIC19.67■□□□□ 0.74
RHBDL3P58872 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RHBDL3P58872 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 AP001094.4-201ENST00000579008 2176 ntBASIC19.67■□□□□ 0.74
RHBDL3P58872 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDL3P58872 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDL3P58872 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.66■□□□□ 0.74
RHBDL3P58872 AL603756.1-201ENST00000606511 2163 ntBASIC19.66■□□□□ 0.74
RHBDL3P58872 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 GGT4P-201ENST00000623672 1708 ntBASIC19.66■□□□□ 0.74
RHBDL3P58872 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.66■□□□□ 0.74
RHBDL3P58872 AC093724.1-201ENST00000448659 1027 ntBASIC19.66■□□□□ 0.74
RHBDL3P58872 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.66■□□□□ 0.74
RHBDL3P58872 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RHBDL3P58872 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.66■□□□□ 0.74
RHBDL3P58872 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RHBDL3P58872 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RHBDL3P58872 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDL3P58872 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.65■□□□□ 0.74
RHBDL3P58872 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RHBDL3P58872 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.65■□□□□ 0.74
RHBDL3P58872 AL512638.1-201ENST00000457493 794 ntBASIC19.65■□□□□ 0.74
RHBDL3P58872 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.65■□□□□ 0.74
RHBDL3P58872 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.65■□□□□ 0.74
RHBDL3P58872 AL133215.2-201ENST00000609242 977 ntBASIC19.65■□□□□ 0.74
RHBDL3P58872 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.65■□□□□ 0.74
RHBDL3P58872 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RHBDL3P58872 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.65■□□□□ 0.74
RHBDL3P58872 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.65■□□□□ 0.74
RHBDL3P58872 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RHBDL3P58872 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDL3P58872 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHBDL3P58872 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHBDL3P58872 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RHBDL3P58872 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDL3P58872 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms