Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH13P55290 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH13P55290 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDH13P55290 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDH13P55290 AL356309.3-201ENST00000624132 1934 ntBASIC16.47■□□□□ 0.23
CDH13P55290 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH13P55290 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDH13P55290 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 AC006277.1-201ENST00000624348 1610 ntBASIC16.46■□□□□ 0.23
CDH13P55290 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH13P55290 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.46■□□□□ 0.23
CDH13P55290 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH13P55290 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH13P55290 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH13P55290 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH13P55290 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH13P55290 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH13P55290 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CDH13P55290 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH13P55290 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH13P55290 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH13P55290 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH13P55290 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 ME2P1-201ENST00000426028 1970 ntBASIC16.45■□□□□ 0.22
CDH13P55290 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH13P55290 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.45■□□□□ 0.22
CDH13P55290 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH13P55290 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH13P55290 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH13P55290 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH13P55290 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH13P55290 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 RBM17P3-201ENST00000417687 1192 ntBASIC16.44■□□□□ 0.22
CDH13P55290 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms