Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDH12P55289 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.71■□□□□ 0.11
CDH12P55289 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH12P55289 AC099336.1-202ENST00000602961 463 ntBASIC15.71■□□□□ 0.11
CDH12P55289 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH12P55289 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH12P55289 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH12P55289 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDH12P55289 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH12P55289 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CDH12P55289 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH12P55289 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.71■□□□□ 0.1
CDH12P55289 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH12P55289 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH12P55289 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH12P55289 AL020989.1-201ENST00000422979 469 ntBASIC15.7■□□□□ 0.1
CDH12P55289 ATP5G2P1-201ENST00000433580 426 ntBASIC15.7■□□□□ 0.1
CDH12P55289 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 SIGLEC30P-201ENST00000455569 941 ntBASIC15.7■□□□□ 0.1
CDH12P55289 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.7■□□□□ 0.1
CDH12P55289 AC091076.1-201ENST00000610741 619 ntBASIC15.7■□□□□ 0.1
CDH12P55289 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH12P55289 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH12P55289 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH12P55289 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH12P55289 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CDH12P55289 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH12P55289 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH12P55289 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH12P55289 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH12P55289 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH12P55289 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDH12P55289 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH12P55289 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH12P55289 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH12P55289 SPDYE21P-201ENST00000413323 827 ntBASIC15.69■□□□□ 0.1
CDH12P55289 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH12P55289 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 MIR5100-201ENST00000579544 119 ntBASIC15.69■□□□□ 0.1
CDH12P55289 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH12P55289 AL445228.2-201ENST00000605589 952 ntBASIC15.69■□□□□ 0.1
CDH12P55289 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH12P55289 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH12P55289 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms