Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH6P55285 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH6P55285 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH6P55285 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.48■□□□□ 0.39
CDH6P55285 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 PGM5P2-202ENST00000637225 1043 ntBASIC17.48■□□□□ 0.39
CDH6P55285 AL139011.1-202ENST00000642063 584 ntBASIC17.48■□□□□ 0.39
CDH6P55285 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH6P55285 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH6P55285 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH6P55285 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH6P55285 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH6P55285 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH6P55285 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH6P55285 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH6P55285 AL662844.4-201ENST00000606367 2838 ntBASIC17.48■□□□□ 0.39
CDH6P55285 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH6P55285 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH6P55285 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH6P55285 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH6P55285 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
CDH6P55285 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH6P55285 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH6P55285 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH6P55285 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 AC091167.2-201ENST00000579581 588 ntBASIC17.47■□□□□ 0.39
CDH6P55285 MIR4492-201ENST00000581627 80 ntBASIC17.47■□□□□ 0.39
CDH6P55285 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDH6P55285 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH6P55285 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH6P55285 AC131009.4-201ENST00000624048 1740 ntBASIC17.47■□□□□ 0.39
CDH6P55285 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH6P55285 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH6P55285 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH6P55285 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH6P55285 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH6P55285 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH6P55285 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CDH6P55285 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDH6P55285 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 AL031284.1-201ENST00000419297 478 ntBASIC17.46■□□□□ 0.39
CDH6P55285 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 PMS2P1-201ENST00000431037 1228 ntBASIC17.46■□□□□ 0.39
CDH6P55285 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH6P55285 AC092910.1-201ENST00000482027 1129 ntBASIC17.46■□□□□ 0.39
CDH6P55285 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 AL049840.3-201ENST00000602669 611 ntBASIC17.46■□□□□ 0.39
CDH6P55285 AC117500.6-201ENST00000624871 588 ntBASIC17.46■□□□□ 0.39
CDH6P55285 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 ALOX12P2-203ENST00000570921 1945 ntBASIC17.46■□□□□ 0.39
CDH6P55285 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH6P55285 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH6P55285 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH6P55285 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.46■□□□□ 0.38
CDH6P55285 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
CDH6P55285 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms