Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCS2P54868 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGCS2P54868 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.24■□□□□ 0.67
HMGCS2P54868 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCS2P54868 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCS2P54868 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCS2P54868 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HMGCS2P54868 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGCS2P54868 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCS2P54868 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 RNA5SP410-201ENST00000516285 106 ntBASIC19.23■□□□□ 0.67
HMGCS2P54868 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HMGCS2P54868 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.23■□□□□ 0.67
HMGCS2P54868 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 AC092068.3-201ENST00000587894 2016 ntBASIC19.23■□□□□ 0.67
HMGCS2P54868 AC138932.1-201ENST00000534164 6830 ntBASIC19.23■□□□□ 0.67
HMGCS2P54868 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 AC087499.5-201ENST00000452760 1342 ntBASIC19.23■□□□□ 0.67
HMGCS2P54868 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCS2P54868 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMGCS2P54868 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCS2P54868 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGCS2P54868 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.22■□□□□ 0.67
HMGCS2P54868 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.22■□□□□ 0.67
HMGCS2P54868 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.22■□□□□ 0.67
HMGCS2P54868 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 AC098859.1-201ENST00000502915 1238 ntBASIC19.22■□□□□ 0.67
HMGCS2P54868 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 AC105021.1-202ENST00000570572 669 ntBASIC19.22■□□□□ 0.67
HMGCS2P54868 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGCS2P54868 AC013467.2-201ENST00000605472 835 ntBASIC19.22■□□□□ 0.67
HMGCS2P54868 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HMGCS2P54868 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
HMGCS2P54868 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCS2P54868 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HMGCS2P54868 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCS2P54868 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCS2P54868 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGCS2P54868 AC018470.1-201ENST00000624790 3129 ntBASIC19.21■□□□□ 0.67
HMGCS2P54868 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HMGCS2P54868 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGCS2P54868 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
HMGCS2P54868 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGCS2P54868 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCS2P54868 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCS2P54868 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGCS2P54868 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCS2P54868 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCS2P54868 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCS2P54868 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGCS2P54868 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCS2P54868 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.21■□□□□ 0.67
HMGCS2P54868 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGCS2P54868 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCS2P54868 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms