Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC23.67■■□□□ 1.38
CLTCL1P53675 OR8S1-201ENST00000310194 1080 ntBASIC23.66■■□□□ 1.38
CLTCL1P53675 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC23.66■■□□□ 1.38
CLTCL1P53675 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC23.66■■□□□ 1.38
CLTCL1P53675 RAB35-202ENST00000534951 939 ntTSL 2 BASIC23.66■■□□□ 1.38
CLTCL1P53675 AC044860.1-202ENST00000559481 777 ntBASIC23.66■■□□□ 1.38
CLTCL1P53675 AC024267.1-201ENST00000582320 895 ntBASIC23.66■■□□□ 1.38
CLTCL1P53675 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC23.66■■□□□ 1.38
CLTCL1P53675 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC23.66■■□□□ 1.38
CLTCL1P53675 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.66■■□□□ 1.38
CLTCL1P53675 RELA-227ENST00000615805 2236 ntTSL 5 BASIC23.66■■□□□ 1.38
CLTCL1P53675 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC23.66■■□□□ 1.38
CLTCL1P53675 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC23.66■■□□□ 1.38
CLTCL1P53675 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.66■■□□□ 1.38
CLTCL1P53675 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC23.66■■□□□ 1.38
CLTCL1P53675 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC23.66■■□□□ 1.38
CLTCL1P53675 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CLTCL1P53675 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CLTCL1P53675 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC23.66■■□□□ 1.38
CLTCL1P53675 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC23.66■■□□□ 1.38
CLTCL1P53675 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLTCL1P53675 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC23.66■■□□□ 1.38
CLTCL1P53675 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.65■■□□□ 1.38
CLTCL1P53675 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLTCL1P53675 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLTCL1P53675 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
CLTCL1P53675 CU639417.3-201ENST00000624240 1404 ntBASIC23.65■■□□□ 1.38
CLTCL1P53675 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC23.65■■□□□ 1.38
CLTCL1P53675 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CLTCL1P53675 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLTCL1P53675 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
CLTCL1P53675 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC23.65■■□□□ 1.38
CLTCL1P53675 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC23.65■■□□□ 1.38
CLTCL1P53675 TP53TG3HP-202ENST00000569755 579 ntBASIC23.65■■□□□ 1.38
CLTCL1P53675 AC007431.3-201ENST00000623221 587 ntBASIC23.65■■□□□ 1.38
CLTCL1P53675 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLTCL1P53675 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.65■■□□□ 1.38
CLTCL1P53675 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLTCL1P53675 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.38
CLTCL1P53675 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLTCL1P53675 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLTCL1P53675 NME2P1-201ENST00000426182 414 ntBASIC23.64■■□□□ 1.38
CLTCL1P53675 AC114501.2-201ENST00000439631 535 ntBASIC23.64■■□□□ 1.38
CLTCL1P53675 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLTCL1P53675 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC23.64■■□□□ 1.38
CLTCL1P53675 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC23.64■■□□□ 1.38
CLTCL1P53675 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CLTCL1P53675 CR383656.12-201ENST00000549567 513 ntBASIC23.64■■□□□ 1.38
CLTCL1P53675 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLTCL1P53675 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLTCL1P53675 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CLTCL1P53675 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CLTCL1P53675 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLTCL1P53675 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC23.64■■□□□ 1.37
CLTCL1P53675 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLTCL1P53675 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CLTCL1P53675 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CLTCL1P53675 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
CLTCL1P53675 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC23.64■■□□□ 1.37
CLTCL1P53675 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC23.64■■□□□ 1.37
CLTCL1P53675 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC23.63■■□□□ 1.37
CLTCL1P53675 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.63■■□□□ 1.37
CLTCL1P53675 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC23.63■■□□□ 1.37
CLTCL1P53675 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC23.63■■□□□ 1.37
CLTCL1P53675 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC23.63■■□□□ 1.37
CLTCL1P53675 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC23.63■■□□□ 1.37
CLTCL1P53675 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLTCL1P53675 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLTCL1P53675 SLC7A15P-201ENST00000424028 1363 ntBASIC23.63■■□□□ 1.37
CLTCL1P53675 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLTCL1P53675 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLTCL1P53675 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLTCL1P53675 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLTCL1P53675 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC23.63■■□□□ 1.37
CLTCL1P53675 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CLTCL1P53675 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
CLTCL1P53675 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 AC244107.1-201ENST00000442033 332 ntBASIC23.62■■□□□ 1.37
CLTCL1P53675 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 AC027307.3-201ENST00000594262 1100 ntBASIC23.62■■□□□ 1.37
CLTCL1P53675 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC23.62■■□□□ 1.37
CLTCL1P53675 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC23.62■■□□□ 1.37
CLTCL1P53675 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CLTCL1P53675 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms