Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HMGA2P52926 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGA2P52926 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HMGA2P52926 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 NCF1C-201ENST00000438382 1427 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.34■□□□□ 0.05
HMGA2P52926 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.34■□□□□ 0.05
HMGA2P52926 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HMGA2P52926 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HMGA2P52926 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGA2P52926 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGA2P52926 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.33■□□□□ 0.05
HMGA2P52926 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGA2P52926 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HMGA2P52926 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGA2P52926 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HMGA2P52926 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.33■□□□□ 0.05
HMGA2P52926 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HMGA2P52926 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGA2P52926 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGA2P52926 AC064862.7-201ENST00000604520 867 ntBASIC15.33■□□□□ 0.04
HMGA2P52926 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGA2P52926 AP005117.1-202ENST00000581724 1908 ntBASIC15.33■□□□□ 0.04
HMGA2P52926 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGA2P52926 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGA2P52926 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 AC112504.1-201ENST00000623415 1841 ntBASIC15.32■□□□□ 0.04
HMGA2P52926 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HMGA2P52926 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGA2P52926 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
HMGA2P52926 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.32■□□□□ 0.04
HMGA2P52926 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGA2P52926 AC074051.2-201ENST00000565115 352 ntBASIC15.32■□□□□ 0.04
HMGA2P52926 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGA2P52926 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HMGA2P52926 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGA2P52926 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
HMGA2P52926 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGA2P52926 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
HMGA2P52926 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HMGA2P52926 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGA2P52926 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGA2P52926 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 GPAA1P2-202ENST00000606848 1787 ntBASIC15.31■□□□□ 0.04
HMGA2P52926 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HMGA2P52926 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGA2P52926 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGA2P52926 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms