Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SRP9P49458 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP9P49458 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SRP9P49458 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 MYCLP1-201ENST00000372451 1075 ntBASIC14.97□□□□□ -0.01
SRP9P49458 TSPY19P-201ENST00000418461 509 ntBASIC14.97□□□□□ -0.01
SRP9P49458 TSPY18P-201ENST00000441642 509 ntBASIC14.97□□□□□ -0.01
SRP9P49458 AC002558.1-201ENST00000488906 803 ntBASIC14.97□□□□□ -0.01
SRP9P49458 KRT18P31-201ENST00000506277 1292 ntBASIC14.97□□□□□ -0.01
SRP9P49458 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.97□□□□□ -0.01
SRP9P49458 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP9P49458 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRP9P49458 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP9P49458 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRP9P49458 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
SRP9P49458 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
SRP9P49458 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SRP9P49458 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP9P49458 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP9P49458 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.96□□□□□ -0.01
SRP9P49458 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.96□□□□□ -0.01
SRP9P49458 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.96□□□□□ -0.01
SRP9P49458 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP9P49458 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP9P49458 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.96□□□□□ -0.01
SRP9P49458 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.96□□□□□ -0.01
SRP9P49458 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SRP9P49458 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP9P49458 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
SRP9P49458 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP9P49458 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP9P49458 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
SRP9P49458 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP9P49458 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SRP9P49458 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP9P49458 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.96□□□□□ -0.02
SRP9P49458 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SRP9P49458 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms