Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CX3CR1P49238 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.79□□□□□ -0.04
CX3CR1P49238 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 FGFR3P6-201ENST00000457012 610 ntBASIC14.79□□□□□ -0.04
CX3CR1P49238 SCARNA2-201ENST00000458748 420 ntBASIC14.79□□□□□ -0.04
CX3CR1P49238 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.79□□□□□ -0.04
CX3CR1P49238 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.79□□□□□ -0.04
CX3CR1P49238 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.79□□□□□ -0.04
CX3CR1P49238 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.79□□□□□ -0.04
CX3CR1P49238 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.79□□□□□ -0.04
CX3CR1P49238 LINC01711-201ENST00000598340 967 ntBASIC14.79□□□□□ -0.04
CX3CR1P49238 MTDHP4-201ENST00000600287 670 ntBASIC14.79□□□□□ -0.04
CX3CR1P49238 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.79□□□□□ -0.04
CX3CR1P49238 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.79□□□□□ -0.04
CX3CR1P49238 LINC00895-201ENST00000629028 1637 ntBASIC14.79□□□□□ -0.04
CX3CR1P49238 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CX3CR1P49238 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CX3CR1P49238 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.78□□□□□ -0.04
CX3CR1P49238 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.78□□□□□ -0.04
CX3CR1P49238 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.78□□□□□ -0.04
CX3CR1P49238 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.78□□□□□ -0.04
CX3CR1P49238 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.78□□□□□ -0.04
CX3CR1P49238 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.78□□□□□ -0.04
CX3CR1P49238 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.78□□□□□ -0.04
CX3CR1P49238 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CX3CR1P49238 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.78□□□□□ -0.04
CX3CR1P49238 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.78□□□□□ -0.04
CX3CR1P49238 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.78□□□□□ -0.04
CX3CR1P49238 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.78□□□□□ -0.04
CX3CR1P49238 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.78□□□□□ -0.04
CX3CR1P49238 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.78□□□□□ -0.04
CX3CR1P49238 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.78□□□□□ -0.04
CX3CR1P49238 REXO1L6P-202ENST00000619970 1078 ntBASIC14.78□□□□□ -0.04
CX3CR1P49238 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.78□□□□□ -0.04
CX3CR1P49238 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms