Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A1P43005 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.58■□□□□ 0.4
SLC1A1P43005 ELK2BP-201ENST00000415014 1224 ntBASIC17.58■□□□□ 0.4
SLC1A1P43005 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC1A1P43005 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC1A1P43005 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC1A1P43005 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC1A1P43005 GGTLC5P-201ENST00000617623 998 ntBASIC17.58■□□□□ 0.4
SLC1A1P43005 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A1P43005 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A1P43005 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC1A1P43005 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A1P43005 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
SLC1A1P43005 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SLC1A1P43005 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 AL031731.1-201ENST00000642131 2094 ntBASIC17.57■□□□□ 0.4
SLC1A1P43005 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLC1A1P43005 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC1A1P43005 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 AF238378.1-201ENST00000526806 358 ntBASIC17.57■□□□□ 0.4
SLC1A1P43005 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC1A1P43005 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A1P43005 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
SLC1A1P43005 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A1P43005 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A1P43005 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A1P43005 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A1P43005 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC1A1P43005 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 GGT4P-201ENST00000623672 1708 ntBASIC17.56■□□□□ 0.4
SLC1A1P43005 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 AC022188.1-201ENST00000620960 1664 ntBASIC17.56■□□□□ 0.4
SLC1A1P43005 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC1A1P43005 KRT18P27-201ENST00000427733 1299 ntBASIC17.56■□□□□ 0.4
SLC1A1P43005 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.56■□□□□ 0.4
SLC1A1P43005 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC1A1P43005 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
SLC1A1P43005 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC1A1P43005 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC1A1P43005 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC1A1P43005 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SLC1A1P43005 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A1P43005 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms