Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPHP41219 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPHP41219 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
PRPHP41219 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRPHP41219 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PRPHP41219 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.95■□□□□ 0.62
PRPHP41219 RHOQP3-201ENST00000437982 621 ntBASIC18.95■□□□□ 0.62
PRPHP41219 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPHP41219 AC096734.2-201ENST00000562054 433 ntBASIC18.95■□□□□ 0.62
PRPHP41219 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPHP41219 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.95■□□□□ 0.62
PRPHP41219 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPHP41219 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.95■□□□□ 0.62
PRPHP41219 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPHP41219 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRPHP41219 BX640515.1-201ENST00000617215 977 ntBASIC18.95■□□□□ 0.62
PRPHP41219 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.95■□□□□ 0.62
PRPHP41219 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRPHP41219 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPHP41219 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.95■□□□□ 0.62
PRPHP41219 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
PRPHP41219 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPHP41219 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPHP41219 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.95■□□□□ 0.62
PRPHP41219 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
PRPHP41219 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRPHP41219 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.94■□□□□ 0.62
PRPHP41219 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 AC104109.2-201ENST00000602919 1418 ntBASIC18.94■□□□□ 0.62
PRPHP41219 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 AC026396.1-201ENST00000419388 421 ntBASIC18.94■□□□□ 0.62
PRPHP41219 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.94■□□□□ 0.62
PRPHP41219 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.94■□□□□ 0.62
PRPHP41219 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.94■□□□□ 0.62
PRPHP41219 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.94■□□□□ 0.62
PRPHP41219 AL645728.2-201ENST00000641974 660 ntBASIC18.94■□□□□ 0.62
PRPHP41219 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 UBALD1-205ENST00000590891 2641 ntBASIC18.94■□□□□ 0.62
PRPHP41219 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PRPHP41219 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.94■□□□□ 0.62
PRPHP41219 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PRPHP41219 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPHP41219 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPHP41219 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPHP41219 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
PRPHP41219 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.93■□□□□ 0.62
PRPHP41219 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPHP41219 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.93■□□□□ 0.62
PRPHP41219 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.93■□□□□ 0.62
PRPHP41219 RPL13AP23-201ENST00000480739 586 ntBASIC18.93■□□□□ 0.62
PRPHP41219 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
PRPHP41219 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.93■□□□□ 0.62
PRPHP41219 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPHP41219 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPHP41219 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPHP41219 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPHP41219 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPHP41219 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPHP41219 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
PRPHP41219 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.92■□□□□ 0.62
PRPHP41219 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPHP41219 GGT3P-204ENST00000453783 1664 ntBASIC18.92■□□□□ 0.62
PRPHP41219 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PRPHP41219 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPHP41219 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.92■□□□□ 0.62
PRPHP41219 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms