Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MDH1P40925 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MDH1P40925 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.9■□□□□ 0.3
MDH1P40925 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.9■□□□□ 0.3
MDH1P40925 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.9■□□□□ 0.3
MDH1P40925 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.9■□□□□ 0.3
MDH1P40925 AC128676.1-201ENST00000454392 318 ntBASIC16.9■□□□□ 0.3
MDH1P40925 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.9■□□□□ 0.3
MDH1P40925 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.9■□□□□ 0.3
MDH1P40925 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.9■□□□□ 0.3
MDH1P40925 AC063926.3-201ENST00000624734 5658 ntBASIC16.9■□□□□ 0.3
MDH1P40925 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
MDH1P40925 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.9■□□□□ 0.3
MDH1P40925 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.9■□□□□ 0.3
MDH1P40925 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.9■□□□□ 0.3
MDH1P40925 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.9■□□□□ 0.3
MDH1P40925 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.9■□□□□ 0.3
MDH1P40925 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 NORAD-201ENST00000565493 5339 ntBASIC16.9■□□□□ 0.3
MDH1P40925 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.9■□□□□ 0.3
MDH1P40925 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
MDH1P40925 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MDH1P40925 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MDH1P40925 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MDH1P40925 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
MDH1P40925 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.89■□□□□ 0.3
MDH1P40925 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MDH1P40925 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
MDH1P40925 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MDH1P40925 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 SSR4P1-203ENST00000599569 2260 ntBASIC16.89■□□□□ 0.29
MDH1P40925 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MDH1P40925 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.89■□□□□ 0.29
MDH1P40925 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
MDH1P40925 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.89■□□□□ 0.29
MDH1P40925 AC007967.3-201ENST00000434308 558 ntBASIC16.89■□□□□ 0.29
MDH1P40925 KRT18P48-201ENST00000434763 852 ntBASIC16.89■□□□□ 0.29
MDH1P40925 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.89■□□□□ 0.29
MDH1P40925 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.89■□□□□ 0.29
MDH1P40925 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MDH1P40925 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
MDH1P40925 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 AC097637.2-201ENST00000624096 1997 ntBASIC16.89■□□□□ 0.29
MDH1P40925 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.89■□□□□ 0.29
MDH1P40925 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MDH1P40925 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MDH1P40925 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 AC023908.3-201ENST00000564211 3047 ntBASIC16.88■□□□□ 0.29
MDH1P40925 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MDH1P40925 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 AC016027.1-202ENST00000607927 1699 ntBASIC16.88■□□□□ 0.29
MDH1P40925 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.88■□□□□ 0.29
MDH1P40925 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.88■□□□□ 0.29
MDH1P40925 RPS2P55-201ENST00000397318 883 ntBASIC16.88■□□□□ 0.29
MDH1P40925 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms