Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
EPHA3P29320 AC004817.3-201ENST00000602957 2129 ntBASIC16.39■□□□□ 0.21
EPHA3P29320 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
EPHA3P29320 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHA3P29320 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA3P29320 AP002414.1-201ENST00000391405 1147 ntBASIC16.39■□□□□ 0.21
EPHA3P29320 AL020989.1-201ENST00000422979 469 ntBASIC16.39■□□□□ 0.21
EPHA3P29320 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.39■□□□□ 0.21
EPHA3P29320 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHA3P29320 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHA3P29320 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHA3P29320 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
EPHA3P29320 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
EPHA3P29320 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHA3P29320 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHA3P29320 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHA3P29320 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
EPHA3P29320 AC097637.2-201ENST00000624096 1997 ntBASIC16.38■□□□□ 0.21
EPHA3P29320 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHA3P29320 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
EPHA3P29320 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHA3P29320 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.38■□□□□ 0.21
EPHA3P29320 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
EPHA3P29320 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.38■□□□□ 0.21
EPHA3P29320 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 INTS4P1-201ENST00000438455 1935 ntBASIC16.38■□□□□ 0.21
EPHA3P29320 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
EPHA3P29320 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
EPHA3P29320 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHA3P29320 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.38■□□□□ 0.21
EPHA3P29320 AC023824.1-201ENST00000562945 2975 ntBASIC16.38■□□□□ 0.21
EPHA3P29320 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHA3P29320 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 KRT8P49-201ENST00000604166 1432 ntBASIC16.37■□□□□ 0.21
EPHA3P29320 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.37■□□□□ 0.21
EPHA3P29320 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
EPHA3P29320 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 AC010491.1-201ENST00000563101 2797 ntBASIC16.37■□□□□ 0.21
EPHA3P29320 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.37■□□□□ 0.21
EPHA3P29320 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.37■□□□□ 0.21
EPHA3P29320 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.37■□□□□ 0.21
EPHA3P29320 AL136038.3-201ENST00000561909 1096 ntBASIC16.37■□□□□ 0.21
EPHA3P29320 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 NTF6B-201ENST00000591913 560 ntBASIC16.37■□□□□ 0.21
EPHA3P29320 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.37■□□□□ 0.21
EPHA3P29320 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
EPHA3P29320 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.37■□□□□ 0.21
EPHA3P29320 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EPHA3P29320 AC006277.1-201ENST00000624348 1610 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms