Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 PCDHB18P-201ENST00000524813 2368 ntBASIC14.45□□□□□ -0.1
CD40P25942 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CD40P25942 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 AL139400.1-201ENST00000366220 510 ntBASIC14.45□□□□□ -0.1
CD40P25942 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 AL645939.2-201ENST00000427340 991 ntBASIC14.45□□□□□ -0.1
CD40P25942 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40P25942 IGHV3-62-201ENST00000520057 340 ntBASIC14.45□□□□□ -0.1
CD40P25942 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40P25942 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40P25942 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 AC004449.1-201ENST00000564240 433 ntBASIC14.45□□□□□ -0.1
CD40P25942 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.45□□□□□ -0.1
CD40P25942 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.45□□□□□ -0.1
CD40P25942 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 AC013467.2-201ENST00000605472 835 ntBASIC14.45□□□□□ -0.1
CD40P25942 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD40P25942 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CD40P25942 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD40P25942 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.44□□□□□ -0.1
CD40P25942 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.44□□□□□ -0.1
CD40P25942 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.44□□□□□ -0.1
CD40P25942 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.44□□□□□ -0.1
CD40P25942 SPCS2P4-201ENST00000436160 681 ntBASIC14.44□□□□□ -0.1
CD40P25942 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 HLA-J-203ENST00000494367 1087 ntBASIC14.44□□□□□ -0.1
CD40P25942 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.44□□□□□ -0.1
CD40P25942 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.44□□□□□ -0.1
CD40P25942 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.44□□□□□ -0.1
CD40P25942 AC093520.2-201ENST00000561830 333 ntBASIC14.44□□□□□ -0.1
CD40P25942 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 AC093028.1-201ENST00000622998 982 ntBASIC14.44□□□□□ -0.1
CD40P25942 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD40P25942 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.44□□□□□ -0.1
CD40P25942 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.44□□□□□ -0.1
CD40P25942 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.44□□□□□ -0.1
CD40P25942 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40P25942 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40P25942 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40P25942 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40P25942 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40P25942 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40P25942 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40P25942 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms