Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCND1P24385 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCND1P24385 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.98■□□□□ 0.31
CCND1P24385 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.98■□□□□ 0.31
CCND1P24385 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCND1P24385 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.98■□□□□ 0.31
CCND1P24385 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCND1P24385 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
CCND1P24385 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.97■□□□□ 0.31
CCND1P24385 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCND1P24385 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCND1P24385 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.97■□□□□ 0.31
CCND1P24385 NUS1P2-201ENST00000417358 873 ntBASIC16.97■□□□□ 0.31
CCND1P24385 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.97■□□□□ 0.31
CCND1P24385 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.97■□□□□ 0.31
CCND1P24385 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.97■□□□□ 0.31
CCND1P24385 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.97■□□□□ 0.31
CCND1P24385 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CCND1P24385 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.97■□□□□ 0.31
CCND1P24385 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 AD001527.2-201ENST00000622994 785 ntBASIC16.97■□□□□ 0.31
CCND1P24385 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CCND1P24385 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.97■□□□□ 0.31
CCND1P24385 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCND1P24385 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.97■□□□□ 0.31
CCND1P24385 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.96■□□□□ 0.31
CCND1P24385 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.96■□□□□ 0.31
CCND1P24385 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.96■□□□□ 0.31
CCND1P24385 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.96■□□□□ 0.31
CCND1P24385 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 AC003669.1-201ENST00000334569 611 ntBASIC16.96■□□□□ 0.31
CCND1P24385 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.96■□□□□ 0.31
CCND1P24385 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.96■□□□□ 0.31
CCND1P24385 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.96■□□□□ 0.31
CCND1P24385 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.96■□□□□ 0.31
CCND1P24385 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 MIR5100-201ENST00000579544 119 ntBASIC16.96■□□□□ 0.31
CCND1P24385 AL121772.3-201ENST00000610840 674 ntBASIC16.96■□□□□ 0.31
CCND1P24385 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCND1P24385 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.96■□□□□ 0.31
CCND1P24385 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCND1P24385 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCND1P24385 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCND1P24385 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCND1P24385 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.96■□□□□ 0.3
CCND1P24385 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CCND1P24385 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCND1P24385 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CCND1P24385 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.96■□□□□ 0.3
CCND1P24385 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCND1P24385 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms