Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Z83851.2-201ENST00000609564 659 ntBASIC16.96■□□□□ 0.31
HLA-DPA1P20036 AC006538.1-201ENST00000567905 1585 ntBASIC16.96■□□□□ 0.31
HLA-DPA1P20036 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DPA1P20036 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DPA1P20036 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DPA1P20036 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 FAM185BP-201ENST00000443595 716 ntBASIC16.95■□□□□ 0.3
HLA-DPA1P20036 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 CXCL1P1-201ENST00000502804 216 ntBASIC16.95■□□□□ 0.3
HLA-DPA1P20036 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 AC145285.3-201ENST00000564603 959 ntBASIC16.95■□□□□ 0.3
HLA-DPA1P20036 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.95■□□□□ 0.3
HLA-DPA1P20036 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 FLJ16779-201ENST00000612722 7638 ntBASIC16.95■□□□□ 0.3
HLA-DPA1P20036 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPA1P20036 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 CRYGEP-201ENST00000412192 528 ntBASIC16.94■□□□□ 0.3
HLA-DPA1P20036 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 CYP2A7P1-201ENST00000595391 815 ntBASIC16.94■□□□□ 0.3
HLA-DPA1P20036 ACTL9-202ENST00000612068 1252 ntBASIC16.94■□□□□ 0.3
HLA-DPA1P20036 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPA1P20036 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPA1P20036 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DPA1P20036 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DPA1P20036 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms