Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.33■□□□□ 0.37
BRAFP15056 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
BRAFP15056 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.33■□□□□ 0.37
BRAFP15056 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
BRAFP15056 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
BRAFP15056 EGFEM1P-202ENST00000431685 1563 ntBASIC17.33■□□□□ 0.37
BRAFP15056 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BRAFP15056 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAFP15056 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BRAFP15056 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.33■□□□□ 0.36
BRAFP15056 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 FAM220CP-201ENST00000395253 831 ntBASIC17.33■□□□□ 0.36
BRAFP15056 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.33■□□□□ 0.36
BRAFP15056 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.33■□□□□ 0.36
BRAFP15056 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.33■□□□□ 0.36
BRAFP15056 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.33■□□□□ 0.36
BRAFP15056 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 AL121912.1-201ENST00000603683 238 ntBASIC17.33■□□□□ 0.36
BRAFP15056 AP001269.4-201ENST00000609611 512 ntBASIC17.33■□□□□ 0.36
BRAFP15056 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAFP15056 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.33■□□□□ 0.36
BRAFP15056 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.33■□□□□ 0.36
BRAFP15056 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 HLA-A-202ENST00000376806 1854 ntBASIC17.33■□□□□ 0.36
BRAFP15056 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAFP15056 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BRAFP15056 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.32■□□□□ 0.36
BRAFP15056 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 COX5BP2-201ENST00000392354 334 ntBASIC17.32■□□□□ 0.36
BRAFP15056 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.32■□□□□ 0.36
BRAFP15056 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.32■□□□□ 0.36
BRAFP15056 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
BRAFP15056 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BRAFP15056 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BRAFP15056 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BRAFP15056 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAFP15056 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
BRAFP15056 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms