Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.4■□□□□ 0.38
CD48P09326 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CD48P09326 AC098831.1-202ENST00000438821 336 ntBASIC17.4■□□□□ 0.38
CD48P09326 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.4■□□□□ 0.38
CD48P09326 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.4■□□□□ 0.38
CD48P09326 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
CD48P09326 CYP2A7P1-201ENST00000595391 815 ntBASIC17.4■□□□□ 0.38
CD48P09326 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.4■□□□□ 0.38
CD48P09326 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.4■□□□□ 0.38
CD48P09326 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.4■□□□□ 0.38
CD48P09326 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CD48P09326 AL391005.1-201ENST00000623953 2435 ntBASIC17.4■□□□□ 0.38
CD48P09326 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CD48P09326 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CD48P09326 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.39■□□□□ 0.38
CD48P09326 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.39■□□□□ 0.38
CD48P09326 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CD48P09326 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD48P09326 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.39■□□□□ 0.37
CD48P09326 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CD48P09326 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
CD48P09326 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CD48P09326 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.39■□□□□ 0.37
CD48P09326 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.39■□□□□ 0.37
CD48P09326 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CD48P09326 PGM5P2-202ENST00000637225 1043 ntBASIC17.39■□□□□ 0.37
CD48P09326 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.39■□□□□ 0.37
CD48P09326 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 AL031731.1-201ENST00000642131 2094 ntBASIC17.39■□□□□ 0.37
CD48P09326 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.39■□□□□ 0.37
CD48P09326 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CD48P09326 ME2P1-201ENST00000426028 1970 ntBASIC17.39■□□□□ 0.37
CD48P09326 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD48P09326 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CD48P09326 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.38■□□□□ 0.37
CD48P09326 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD48P09326 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 GGT4P-201ENST00000623672 1708 ntBASIC17.38■□□□□ 0.37
CD48P09326 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.38■□□□□ 0.37
CD48P09326 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 AL353732.1-201ENST00000569618 1459 ntBASIC17.38■□□□□ 0.37
CD48P09326 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CD48P09326 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.38■□□□□ 0.37
CD48P09326 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD48P09326 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.38■□□□□ 0.37
CD48P09326 MRPL20P1-201ENST00000400819 433 ntBASIC17.38■□□□□ 0.37
CD48P09326 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.38■□□□□ 0.37
CD48P09326 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.38■□□□□ 0.37
CD48P09326 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.38■□□□□ 0.37
CD48P09326 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 AC129492.6-201ENST00000611383 1305 ntBASIC17.38■□□□□ 0.37
CD48P09326 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.38■□□□□ 0.37
CD48P09326 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD48P09326 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD48P09326 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms