Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CAPN1P07384 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CAPN1P07384 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CAPN1P07384 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CAPN1P07384 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 ACTG1P4-201ENST00000425123 1122 ntBASIC16.58■□□□□ 0.24
CAPN1P07384 KRT18P27-201ENST00000427733 1299 ntBASIC16.58■□□□□ 0.24
CAPN1P07384 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPN1P07384 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 PGAM5P1-201ENST00000518923 814 ntBASIC16.58■□□□□ 0.24
CAPN1P07384 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPN1P07384 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPN1P07384 TERC-201ENST00000602385 541 ntBASIC16.58■□□□□ 0.24
CAPN1P07384 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPN1P07384 PMS2P7-201ENST00000506558 1336 ntBASIC16.58■□□□□ 0.24
CAPN1P07384 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CAPN1P07384 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.58■□□□□ 0.24
CAPN1P07384 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.58■□□□□ 0.24
CAPN1P07384 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CAPN1P07384 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CAPN1P07384 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 AL603756.1-201ENST00000606511 2163 ntBASIC16.58■□□□□ 0.24
CAPN1P07384 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
CAPN1P07384 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CAPN1P07384 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CAPN1P07384 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CAPN1P07384 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CAPN1P07384 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPN1P07384 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CAPN1P07384 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 MIR940-201ENST00000401276 94 ntBASIC16.57■□□□□ 0.24
CAPN1P07384 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.57■□□□□ 0.24
CAPN1P07384 UNC93B6-202ENST00000528242 690 ntBASIC16.57■□□□□ 0.24
CAPN1P07384 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 Z83851.2-201ENST00000609564 659 ntBASIC16.57■□□□□ 0.24
CAPN1P07384 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPN1P07384 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.57■□□□□ 0.24
CAPN1P07384 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CAPN1P07384 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 AC097637.2-201ENST00000624096 1997 ntBASIC16.57■□□□□ 0.24
CAPN1P07384 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CAPN1P07384 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.57■□□□□ 0.24
CAPN1P07384 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.56■□□□□ 0.24
CAPN1P07384 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CAPN1P07384 AC073621.1-201ENST00000392730 636 ntBASIC16.56■□□□□ 0.24
CAPN1P07384 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CAPN1P07384 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms