Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
APPP05067 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
APPP05067 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.14■□□□□ 0.81
APPP05067 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
APPP05067 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.14■□□□□ 0.81
APPP05067 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.14■□□□□ 0.81
APPP05067 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 MCCD1P2-201ENST00000423228 335 ntBASIC20.14■□□□□ 0.81
APPP05067 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.14■□□□□ 0.81
APPP05067 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.14■□□□□ 0.81
APPP05067 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.14■□□□□ 0.81
APPP05067 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.14■□□□□ 0.81
APPP05067 MIR3687-2-201ENST00000577708 61 ntBASIC20.14■□□□□ 0.81
APPP05067 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.14■□□□□ 0.81
APPP05067 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.14■□□□□ 0.81
APPP05067 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.14■□□□□ 0.81
APPP05067 MIR3687-1-201ENST00000614492 61 ntBASIC20.14■□□□□ 0.81
APPP05067 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
APPP05067 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
APPP05067 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APPP05067 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.13■□□□□ 0.81
APPP05067 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
APPP05067 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
APPP05067 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.13■□□□□ 0.81
APPP05067 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 DNAJB3-201ENST00000446806 729 ntBASIC20.13■□□□□ 0.81
APPP05067 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.13■□□□□ 0.81
APPP05067 AC087641.1-201ENST00000557561 1021 ntBASIC20.13■□□□□ 0.81
APPP05067 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.13■□□□□ 0.81
APPP05067 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.13■□□□□ 0.81
APPP05067 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.13■□□□□ 0.81
APPP05067 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.13■□□□□ 0.81
APPP05067 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.13■□□□□ 0.81
APPP05067 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.13■□□□□ 0.81
APPP05067 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 AC022211.2-201ENST00000585075 2527 ntBASIC20.13■□□□□ 0.81
APPP05067 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
APPP05067 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.13■□□□□ 0.81
APPP05067 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APPP05067 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.13■□□□□ 0.81
APPP05067 AC092919.2-201ENST00000623631 1645 ntBASIC20.13■□□□□ 0.81
APPP05067 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.12■□□□□ 0.81
APPP05067 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
APPP05067 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
APPP05067 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
APPP05067 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
APPP05067 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 HMGA1P7-201ENST00000406908 502 ntBASIC20.12■□□□□ 0.81
APPP05067 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.12■□□□□ 0.81
APPP05067 HCG4-201ENST00000418983 998 ntBASIC20.12■□□□□ 0.81
APPP05067 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.12■□□□□ 0.81
APPP05067 AC112482.1-201ENST00000492080 688 ntBASIC20.12■□□□□ 0.81
APPP05067 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.12■□□□□ 0.81
APPP05067 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
APPP05067 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.12■□□□□ 0.81
APPP05067 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.12■□□□□ 0.81
APPP05067 AP001350.2-201ENST00000625104 1094 ntBASIC20.12■□□□□ 0.81
APPP05067 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APPP05067 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.12■□□□□ 0.81
APPP05067 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
APPP05067 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms