Protein–RNA interactions for Protein: P01597

IGKV1-39, Immunoglobulin kappa variable 1-39, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39P01597 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV1-39P01597 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.65□□□□□ -0.22
IGKV1-39P01597 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.65□□□□□ -0.22
IGKV1-39P01597 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
IGKV1-39P01597 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 TOP3BP1-201ENST00000420768 1380 ntBASIC13.64□□□□□ -0.23
IGKV1-39P01597 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 LINC00265-3P-201ENST00000447588 903 ntBASIC13.64□□□□□ -0.23
IGKV1-39P01597 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AC116407.4-201ENST00000623319 1061 ntBASIC13.64□□□□□ -0.23
IGKV1-39P01597 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AC006449.6-201ENST00000612330 2296 ntBASIC13.64□□□□□ -0.23
IGKV1-39P01597 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.64□□□□□ -0.23
IGKV1-39P01597 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV1-39P01597 AL031731.1-201ENST00000642131 2094 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 AC092384.3-202ENST00000564646 2873 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 POM121L3P-201ENST00000419331 1163 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 TMPOP1-202ENST00000424642 1267 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 AC074051.2-201ENST00000565115 352 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 AC010331.1-201ENST00000611423 582 ntBASIC13.63□□□□□ -0.23
IGKV1-39P01597 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV1-39P01597 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV1-39P01597 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms