Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 TSPY14P-201ENST00000303979 915 ntBASIC12.25□□□□□ -0.45
TNFRSF6BO95407 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 AC012618.2-201ENST00000428058 849 ntBASIC12.25□□□□□ -0.45
TNFRSF6BO95407 AL390955.1-201ENST00000428694 934 ntBASIC12.25□□□□□ -0.45
TNFRSF6BO95407 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 UBE2SP1-201ENST00000450587 669 ntBASIC12.25□□□□□ -0.45
TNFRSF6BO95407 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 AC128688.1-201ENST00000487626 519 ntBASIC12.25□□□□□ -0.45
TNFRSF6BO95407 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 AC010491.1-201ENST00000563101 2797 ntBASIC12.25□□□□□ -0.45
TNFRSF6BO95407 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TNFRSF6BO95407 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 ECEL1P2-202ENST00000465689 757 ntBASIC12.24□□□□□ -0.45
TNFRSF6BO95407 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 AP000525.1-201ENST00000608286 694 ntBASIC12.24□□□□□ -0.45
TNFRSF6BO95407 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TNFRSF6BO95407 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms