Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.12■□□□□ 0.01
UBL3O95164 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL3O95164 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL3O95164 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 RPS2P28-201ENST00000314255 741 ntBASIC15.12■□□□□ 0.01
UBL3O95164 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
UBL3O95164 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.12■□□□□ 0.01
UBL3O95164 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL3O95164 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.12■□□□□ 0.01
UBL3O95164 AC021087.4-201ENST00000563761 564 ntBASIC15.12■□□□□ 0.01
UBL3O95164 AC139887.3-201ENST00000568585 713 ntBASIC15.12■□□□□ 0.01
UBL3O95164 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.12■□□□□ 0.01
UBL3O95164 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL3O95164 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.12■□□□□ 0.01
UBL3O95164 AL031008.1-201ENST00000619963 541 ntBASIC15.12■□□□□ 0.01
UBL3O95164 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL3O95164 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 LINC00554-201ENST00000564841 3011 ntBASIC15.12■□□□□ 0.01
UBL3O95164 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBL3O95164 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
UBL3O95164 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL3O95164 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
UBL3O95164 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.12■□□□□ 0.01
UBL3O95164 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.12■□□□□ 0.01
UBL3O95164 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBL3O95164 AC004817.3-201ENST00000602957 2129 ntBASIC15.11■□□□□ 0.01
UBL3O95164 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBL3O95164 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.11■□□□□ 0.01
UBL3O95164 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 AC105917.1-201ENST00000506637 2539 ntBASIC15.11■□□□□ 0.01
UBL3O95164 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
UBL3O95164 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 LINC00982-205ENST00000420957 435 ntBASIC15.11■□□□□ 0.01
UBL3O95164 LAGE3P1-201ENST00000425356 484 ntBASIC15.11■□□□□ 0.01
UBL3O95164 KRT18P67-201ENST00000432816 1264 ntBASIC15.11■□□□□ 0.01
UBL3O95164 AC079781.3-201ENST00000449110 356 ntBASIC15.11■□□□□ 0.01
UBL3O95164 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.11■□□□□ 0.01
UBL3O95164 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 AL160237.2-201ENST00000556165 472 ntBASIC15.11■□□□□ 0.01
UBL3O95164 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.11■□□□□ 0.01
UBL3O95164 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.11■□□□□ 0.01
UBL3O95164 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
UBL3O95164 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBL3O95164 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBL3O95164 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBL3O95164 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL3O95164 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms