Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.89■□□□□ 0.29
GPC4O75487 TPM4P1-201ENST00000436100 807 ntBASIC16.89■□□□□ 0.29
GPC4O75487 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.89■□□□□ 0.29
GPC4O75487 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 AP002469.2-201ENST00000531724 424 ntBASIC16.89■□□□□ 0.29
GPC4O75487 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
GPC4O75487 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.89■□□□□ 0.29
GPC4O75487 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.89■□□□□ 0.29
GPC4O75487 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GPC4O75487 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 AL590787.1-201ENST00000568856 1315 ntBASIC16.89■□□□□ 0.29
GPC4O75487 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GPC4O75487 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.89■□□□□ 0.29
GPC4O75487 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GPC4O75487 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 LAGE3P1-201ENST00000425356 484 ntBASIC16.88■□□□□ 0.29
GPC4O75487 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.88■□□□□ 0.29
GPC4O75487 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 AL603756.1-201ENST00000606511 2163 ntBASIC16.88■□□□□ 0.29
GPC4O75487 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
GPC4O75487 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.88■□□□□ 0.29
GPC4O75487 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GPC4O75487 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPC4O75487 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GPC4O75487 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GPC4O75487 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GPC4O75487 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
GPC4O75487 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GPC4O75487 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.87■□□□□ 0.29
GPC4O75487 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 PCDH8P1-201ENST00000428983 2773 ntBASIC16.87■□□□□ 0.29
GPC4O75487 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GPC4O75487 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GPC4O75487 DOC2GP-204ENST00000639052 2548 ntBASIC16.87■□□□□ 0.29
GPC4O75487 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.87■□□□□ 0.29
GPC4O75487 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.87■□□□□ 0.29
GPC4O75487 RPS2P1-201ENST00000434010 821 ntBASIC16.87■□□□□ 0.29
GPC4O75487 HNRNPDP1-201ENST00000439535 754 ntBASIC16.87■□□□□ 0.29
GPC4O75487 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms