Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 KRT18P16-201ENST00000510337 1294 ntBASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC073869.1-201ENST00000415574 2762 ntBASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 GPX1P1-201ENST00000388829 606 ntBASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC083906.2-201ENST00000511578 360 ntBASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms