Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC162PA2VCL2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CCDC162PA2VCL2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC162PA2VCL2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC162PA2VCL2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC162PA2VCL2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 PMS2P1-201ENST00000431037 1228 ntBASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 AC098831.1-202ENST00000438821 336 ntBASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 OR7E47P-204ENST00000575924 449 ntBASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 MIR4492-201ENST00000581627 80 ntBASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 AC079328.2-201ENST00000561241 3354 ntBASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC162PA2VCL2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 SLC22A20-204ENST00000530038 1673 ntBASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 HLA-A-201ENST00000376802 1334 ntBASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 MRPL20P1-201ENST00000400819 433 ntBASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 AL662844.1-201ENST00000546340 181 ntBASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 AL121894.2-201ENST00000602977 491 ntBASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC162PA2VCL2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 AC008894.3-201ENST00000624324 3103 ntBASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 AC129492.6-201ENST00000611383 1305 ntBASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 AC091167.2-201ENST00000579581 588 ntBASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 SNX33P1-201ENST00000592116 1762 ntBASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 AC006538.1-201ENST00000567905 1585 ntBASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC162PA2VCL2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms