Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC132008.2-207ENST00000454517 770 ntBASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC069148.1-201ENST00000608741 768 ntBASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC092119.3-201ENST00000612618 583 ntBASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AL022326.1-202ENST00000641533 845 ntBASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV9S1A1TA0A576 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 ATP5G2P1-201ENST00000433580 426 ntBASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 AC106795.1-205ENST00000512851 1056 ntBASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 GGT4P-201ENST00000623672 1708 ntBASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 AL031731.1-201ENST00000642131 2094 ntBASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV9S1A1TA0A576 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 PAWRP1-201ENST00000451083 565 ntBASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 KRT16P4-201ENST00000453883 522 ntBASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AC138894.3-201ENST00000603787 634 ntBASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 AL139424.1-201ENST00000607572 797 ntBASIC16.91■□□□□ 0.3
TCRBV9S1A1TA0A576 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms