Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AL080243.2-201ENST00000418783 582 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 GNAQP1-201ENST00000444815 1067 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 GIMAP3P-201ENST00000495150 836 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AC098859.1-201ENST00000502915 1238 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 AC007613.1-201ENST00000572811 2597 ntBASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 RNA5SP410-201ENST00000516285 106 ntBASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 HILS1-202ENST00000545329 423 ntBASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 AL079307.3-201ENST00000556114 283 ntBASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 AC104794.3-201ENST00000566840 1248 ntBASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 BTBD7P1-201ENST00000447253 1453 ntBASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCFC2Q9Y5Z7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 AL671710.1-201ENST00000610245 2349 ntBASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 DGCR5-201ENST00000399539 862 ntBASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 DFFBP1-201ENST00000433250 979 ntBASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 ZNF890P-202ENST00000530367 1156 ntBASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 AC010336.2-201ENST00000564226 506 ntBASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 IGHV3-72-202ENST00000621503 303 ntBASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms