Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHTOPQ9Y3Y2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 AC239809.2-201ENST00000415381 517 ntBASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 AC080038.1-201ENST00000611274 1154 ntBASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.15□□□□□ -0.46
CHTOPQ9Y3Y2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CHTOPQ9Y3Y2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC126177.1-201ENST00000547829 2218 ntBASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC104390.1-201ENST00000555663 520 ntBASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC083880.1-201ENST00000608266 535 ntBASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CHTOPQ9Y3Y2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms