Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 FAM87A-204ENST00000613235 858 ntBASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 AL645728.1-201ENST00000366221 2101 ntBASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCNIP3Q9Y2W7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 GCSHP5-201ENST00000443090 522 ntBASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 GPR32P1-201ENST00000601788 811 ntBASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 AC079602.3-201ENST00000623931 403 ntBASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KCNIP3Q9Y2W7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 MYO15B-237ENST00000642007 4893 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 PRORSD1P-201ENST00000295112 541 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 TSPY7P-201ENST00000431358 1114 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 HLA-F-220ENST00000434407 884 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC122714.2-201ENST00000502787 707 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC141257.4-201ENST00000634557 245 ntBASIC14.12□□□□□ -0.15
KCNIP3Q9Y2W7 AC136944.6-201ENST00000634818 245 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms