Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.06■□□□□ 0
COPS3Q9UNS2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COPS3Q9UNS2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.06■□□□□ 0
COPS3Q9UNS2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.06■□□□□ 0
COPS3Q9UNS2 NSUN5P1-202ENST00000421140 1535 ntBASIC15.06■□□□□ 0
COPS3Q9UNS2 NSUN5P2-203ENST00000457352 1529 ntBASIC15.06■□□□□ 0
COPS3Q9UNS2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
COPS3Q9UNS2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.06■□□□□ 0
COPS3Q9UNS2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COPS3Q9UNS2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.06■□□□□ 0
COPS3Q9UNS2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.06■□□□□ 0
COPS3Q9UNS2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.06■□□□□ 0
COPS3Q9UNS2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COPS3Q9UNS2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COPS3Q9UNS2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COPS3Q9UNS2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.05■□□□□ 0
COPS3Q9UNS2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
COPS3Q9UNS2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COPS3Q9UNS2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
COPS3Q9UNS2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COPS3Q9UNS2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.05■□□□□ 0
COPS3Q9UNS2 AC132872.4-202ENST00000622924 2756 ntBASIC15.05■□□□□ 0
COPS3Q9UNS2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.05■□□□□ 0
COPS3Q9UNS2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.05■□□□□ -0
COPS3Q9UNS2 SPDYE21P-201ENST00000413323 827 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 DRAXINP1-201ENST00000437611 948 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.05■□□□□ -0
COPS3Q9UNS2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
COPS3Q9UNS2 TSSC2-201ENST00000450217 709 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 KRT17P6-201ENST00000453795 1220 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 MINOS1P3-201ENST00000457048 203 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 TOB2P1-201ENST00000469761 992 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.05■□□□□ -0
COPS3Q9UNS2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
COPS3Q9UNS2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
COPS3Q9UNS2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
COPS3Q9UNS2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.05■□□□□ -0
COPS3Q9UNS2 Z69720.1-201ENST00000601483 472 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.05■□□□□ -0
COPS3Q9UNS2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 AC097637.2-201ENST00000624096 1997 ntBASIC15.05■□□□□ -0
COPS3Q9UNS2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
COPS3Q9UNS2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.05■□□□□ -0
COPS3Q9UNS2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
COPS3Q9UNS2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
COPS3Q9UNS2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
COPS3Q9UNS2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.04■□□□□ -0
COPS3Q9UNS2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 AC007950.2-201ENST00000615045 2347 ntBASIC15.04■□□□□ -0
COPS3Q9UNS2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.04■□□□□ -0
COPS3Q9UNS2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.04■□□□□ -0
COPS3Q9UNS2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.04■□□□□ -0
COPS3Q9UNS2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.04■□□□□ -0
COPS3Q9UNS2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.04■□□□□ -0
COPS3Q9UNS2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.04■□□□□ -0
COPS3Q9UNS2 AP002414.4-201ENST00000589764 1148 ntBASIC15.04■□□□□ -0
COPS3Q9UNS2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.04■□□□□ -0
COPS3Q9UNS2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COPS3Q9UNS2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
COPS3Q9UNS2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COPS3Q9UNS2 C8orf49-201ENST00000525043 1968 ntBASIC15.04■□□□□ -0
COPS3Q9UNS2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COPS3Q9UNS2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
COPS3Q9UNS2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
COPS3Q9UNS2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
COPS3Q9UNS2 LINC00895-201ENST00000629028 1637 ntBASIC15.03■□□□□ -0
COPS3Q9UNS2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms