Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AKR1C7P-201ENST00000305623 895 ntBASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 DUSP5P1-201ENST00000441325 1139 ntBASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 UNC93B7-201ENST00000509439 705 ntBASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 NKAPP1-205ENST00000585790 367 ntBASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AC008608.2-201ENST00000606089 416 ntBASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 AL355877.3-201ENST00000622820 899 ntBASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS2Q9NRF8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 CICP6-201ENST00000457191 2729 ntBASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 AL356309.3-201ENST00000624132 1934 ntBASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SAPCD2P3-201ENST00000455031 850 ntBASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms