Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 AC008677.1-201ENST00000519230 1561 ntBASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 PC-204ENST00000524491 1714 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 AC131009.4-201ENST00000624048 1740 ntBASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 LETM1P2-201ENST00000597330 2178 ntBASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 SNX33P1-201ENST00000592116 1762 ntBASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC5.7□□□□□ -1.5
KRTAP4-3Q9BYR4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AL662844.4-201ENST00000606367 2838 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 RNU1-129P-201ENST00000384064 167 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 MIR770-201ENST00000390219 98 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC002056.1-201ENST00000395613 760 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC092474.2-201ENST00000424288 719 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 HLA-J-203ENST00000494367 1087 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 U1.21-201ENST00000580816 167 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms