Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AP005901.3-202ENST00000581653 237 ntBASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AC093458.2-201ENST00000623150 629 ntBASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 HYMAI-201ENST00000635591 3347 ntBASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 Z69720.1-201ENST00000601483 472 ntBASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 AC073592.5-201ENST00000624854 528 ntBASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.13■□□□□ 0.17
THUMPD3Q9BV44 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 MIR3180-1-201ENST00000580374 94 ntBASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 MIR3180-3-201ENST00000584616 94 ntBASIC16.12■□□□□ 0.17
THUMPD3Q9BV44 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms