Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.2□□□□□ -0.62
LITAFQ99732 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 AC006277.1-201ENST00000624348 1610 ntBASIC11.2□□□□□ -0.62
LITAFQ99732 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 AL135905.2-201ENST00000584934 1404 ntBASIC11.19□□□□□ -0.62
LITAFQ99732 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 AL021920.2-201ENST00000624828 1351 ntBASIC11.19□□□□□ -0.62
LITAFQ99732 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 TMBIM7P-203ENST00000641617 1718 ntBASIC11.19□□□□□ -0.62
LITAFQ99732 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
LITAFQ99732 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.19□□□□□ -0.62
LITAFQ99732 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.19□□□□□ -0.62
LITAFQ99732 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 AC009336.1-201ENST00000608941 1553 ntBASIC11.19□□□□□ -0.62
LITAFQ99732 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LITAFQ99732 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.19□□□□□ -0.62
LITAFQ99732 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.19□□□□□ -0.62
LITAFQ99732 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.19□□□□□ -0.62
LITAFQ99732 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LITAFQ99732 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 KRT8P10-201ENST00000450021 1447 ntBASIC11.18□□□□□ -0.62
LITAFQ99732 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.18□□□□□ -0.62
LITAFQ99732 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 GRK6P1-201ENST00000400595 1711 ntBASIC11.18□□□□□ -0.62
LITAFQ99732 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LITAFQ99732 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LITAFQ99732 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms