Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 AC140658.5-201ENST00000438532 169 ntBASIC17.3■□□□□ 0.36
RPRD1AQ96P16 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 AC005829.1-201ENST00000570002 483 ntBASIC17.3■□□□□ 0.36
RPRD1AQ96P16 AP002472.1-201ENST00000577490 586 ntBASIC17.3■□□□□ 0.36
RPRD1AQ96P16 AC013467.2-201ENST00000605472 835 ntBASIC17.3■□□□□ 0.36
RPRD1AQ96P16 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 AL645728.1-201ENST00000366221 2101 ntBASIC17.29■□□□□ 0.36
RPRD1AQ96P16 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 AC112191.1-201ENST00000523689 701 ntBASIC17.29■□□□□ 0.36
RPRD1AQ96P16 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.29■□□□□ 0.36
RPRD1AQ96P16 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 RNU1-129P-201ENST00000384064 167 ntBASIC17.28■□□□□ 0.36
RPRD1AQ96P16 AC002056.1-201ENST00000395613 760 ntBASIC17.28■□□□□ 0.36
RPRD1AQ96P16 MKNK2P1-201ENST00000437526 628 ntBASIC17.28■□□□□ 0.36
RPRD1AQ96P16 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
RPRD1AQ96P16 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 AL031055.1-201ENST00000606362 631 ntBASIC17.28■□□□□ 0.36
RPRD1AQ96P16 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 AC022211.2-201ENST00000585075 2527 ntBASIC17.28■□□□□ 0.36
RPRD1AQ96P16 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPRD1AQ96P16 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPRD1AQ96P16 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RPRD1AQ96P16 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.27■□□□□ 0.36
RPRD1AQ96P16 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.27■□□□□ 0.36
RPRD1AQ96P16 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms